BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C01LP1|AL427448
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1365 1122 0.0
3x_Contig1043 466 e-131
>3x_Contig1365
Length = 9349
Score = 1122 bits (564), Expect = 0.0
Identities = 594/604 (98%), Gaps = 2/604 (0%)
Strand = Plus / Minus
Query: 221 tgtttacactactg-gcagaatggtttcattggaaggtaccctacttgacgattctgcta 279
|||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 9342 tgtttacactactgagcaaaaaggtttcattggaaggtaccctacttgacgattctgcta 9283
Query: 280 gaggttcccattcagaagcggaaaacttacctgtagtttcaaacaagaaaattgttttcg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9282 gaggttcccattcagaagcggaaaacttacctgtagtttcaaacaagaaaattgttttcg 9223
Query: 340 atgatgaagtttctaaagagaatacagattcacacaaagaactggaattgtcggtggtca 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9222 atgatgaagtttctaaagagaatacagattcacacaaagaactggaattgtcggtggtca 9163
Query: 400 aggaagataatggagatgaaattatttatgaaaaagactccagtgatagcgacagttgtg 459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9162 aggaagataatggagatgaaattatttatgaaaaagactccagtgatagcgacagtagtg 9103
Query: 460 agagtrattaaagtgagactagtttatatgahattatttctagagccatatgtgtattaa 519
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9102 agagtgattaaagtgagactagtttatatgaaattatttctagagccatatgtgtattaa 9043
Query: 520 ataatactaactatttctattccatctttaattcagttactggttgtataatattttgtc 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9042 ataatactaactatttctattccatctttaattcagttactggttgtataatattttgtc 8983
Query: 580 agtttgtntgcnctttctaattattcaagtgttcgcgaaaataaaaacagaacataaaag 639
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8982 agtttgtatgcactttctaattattcaagtgttcgcgaaaataaaaacagaacataaaag 8923
Query: 640 atcaacaaacgcaggraaacagaacagagcagaatagctccaagtgacctggactctaca 699
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8922 atcaacaaacgcaggaaaacagaacagagcagaatagctccaagtgacctggactctaca 8863
Query: 700 gccacttagtgaggtcactttaaaaatatccaatgactacaccaactatgcagagtacgt 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8862 gccacttagtgaggtcactttaaaaatatccaatgactacaccaactatgcagagtacgt 8803
Query: 760 ccttgttgacggaacatttrgggttatccaccaatttctttagttgacgacattatcaat 819
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8802 ccttgttgacggaacattt-gggttatccaccaatttctttagttgacgacattatcaat 8744
Query: 820 gccg 823
||||
Sbjct: 8743 gccg 8740
>3x_Contig1043
Length = 5132
Score = 466 bits (234), Expect = e-131
Identities = 241/242 (99%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 2 catccaatctgcgtcccacattggtcttttgatccacgatgctttcaacgcaagcattaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4892 catccaatctgcgtcccacattggtcttttgatccacgatgctttcaacgcaagcattaa 4951
Query: 62 aaaaaacaacattcctaatgattggacgttcattcataacgaagagaccactgaaaacgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4952 aaaaaacaacattcctaatgattggacgttcattcataacgaagagaccactgaaaacgg 5011
Query: 122 acaagactctacagatgatagaaaattccaatcccttggtcattgggtcgatggtaatgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5012 acaagactctacagatgatagaaaattccaatcccttggtcattgggtcgatggtaatgg 5071
Query: 182 ccaacaactcggtggtaaactaaaattcaaagtaaaaaatgtttacactactggcagaat 241
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5072 ccaacaactcggtggtaaactaaaattcaaagtaaaaaatg-ttacactactggcagaat 5130
Query: 242 gg 243
||
Sbjct: 5131 gg 5132
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6756
Number of Sequences: 1807
Number of extensions: 6756
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 2
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)